Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Gm14350-201ENSMUST00000116642 640 ntBASIC10.83□□□□□ -0.68
Smim12Q78RX3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.83□□□□□ -0.68
Smim12Q78RX3 Syt7-204ENSMUST00000223586 1344 ntBASIC10.83□□□□□ -0.68
Smim12Q78RX3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.82□□□□□ -0.68
Smim12Q78RX3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Gm6458-201ENSMUST00000211573 635 ntBASIC10.82□□□□□ -0.68
Smim12Q78RX3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Gm26035-201ENSMUST00000083065 308 ntBASIC10.82□□□□□ -0.68
Smim12Q78RX3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim12Q78RX3 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.81□□□□□ -0.68
Smim12Q78RX3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Gm13689-201ENSMUST00000119360 685 ntBASIC10.81□□□□□ -0.68
Smim12Q78RX3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Gm18307-201ENSMUST00000206864 949 ntBASIC10.81□□□□□ -0.68
Smim12Q78RX3 Gm44872-201ENSMUST00000207864 420 ntBASIC10.81□□□□□ -0.68
Smim12Q78RX3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim12Q78RX3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms