Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm37489-201ENSMUST00000191883 159 ntBASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm38158-201ENSMUST00000194617 339 ntBASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm6458-201ENSMUST00000211573 635 ntBASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb4Q6P8W9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Gm18056-201ENSMUST00000207670 568 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Gm18061-201ENSMUST00000208350 562 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Gm18063-201ENSMUST00000208529 568 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Gm18052-201ENSMUST00000208750 559 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hmgb4Q6P8W9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms