Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm12997-201ENSMUST00000120207 640 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm9083-201ENSMUST00000120423 819 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm12176-201ENSMUST00000121420 875 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm6963-201ENSMUST00000147879 379 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm24845-201ENSMUST00000158034 109 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm25700-201ENSMUST00000177693 110 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Gm19994-201ENSMUST00000217086 586 ntBASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.02□□□□□ -0.17
Smchd1Q6P5D8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gm15276-201ENSMUST00000145953 498 ntBASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gm27341-201ENSMUST00000183570 106 ntBASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gm42937-201ENSMUST00000197360 752 ntBASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.01□□□□□ -0.17
Smchd1Q6P5D8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14□□□□□ -0.17
Smchd1Q6P5D8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14□□□□□ -0.17
Smchd1Q6P5D8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Gm14921-201ENSMUST00000118643 908 ntBASIC14□□□□□ -0.17
Smchd1Q6P5D8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smchd1Q6P5D8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms