Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Gm11637-201ENSMUST00000120601 592 ntBASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Casc4Q6P2L7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm16177-201ENSMUST00000120728 718 ntBASIC13.03□□□□□ -0.32
Casc4Q6P2L7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm43818-201ENSMUST00000200605 466 ntBASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm18062-201ENSMUST00000208020 547 ntBASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm18055-201ENSMUST00000208254 547 ntBASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm25857-201ENSMUST00000082788 129 ntBASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Casc4Q6P2L7 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Casc4Q6P2L7 Gm16479-201ENSMUST00000121706 932 ntBASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Gm26185-201ENSMUST00000157692 266 ntBASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Casc4Q6P2L7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms