Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Scaf8Q6DID3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.03■□□□□ -0
Scaf8Q6DID3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Gm8365-201ENSMUST00000197334 648 ntBASIC15.02■□□□□ -0
Scaf8Q6DID3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.02■□□□□ -0
Scaf8Q6DID3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Scaf8Q6DID3 AC125539.1-202ENSMUST00000226449 670 ntBASIC15.02■□□□□ -0
Scaf8Q6DID3 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.02■□□□□ -0
Scaf8Q6DID3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scaf8Q6DID3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.02■□□□□ -0
Scaf8Q6DID3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scaf8Q6DID3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Gm42651-201ENSMUST00000199851 1339 ntBASIC15.01□□□□□ -0.01
Scaf8Q6DID3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Gm23949-201ENSMUST00000104027 127 ntBASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Gm37246-201ENSMUST00000192665 835 ntBASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scaf8Q6DID3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms