Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.74□□□□□ -0.53
VcanQ62059 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Gm11578-201ENSMUST00000118530 459 ntBASIC11.74□□□□□ -0.53
VcanQ62059 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.74□□□□□ -0.53
VcanQ62059 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.74□□□□□ -0.53
VcanQ62059 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
VcanQ62059 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.74□□□□□ -0.53
VcanQ62059 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VcanQ62059 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VcanQ62059 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.73□□□□□ -0.53
VcanQ62059 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.73□□□□□ -0.53
VcanQ62059 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
VcanQ62059 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VcanQ62059 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VcanQ62059 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VcanQ62059 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.73□□□□□ -0.53
VcanQ62059 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.73□□□□□ -0.53
VcanQ62059 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VcanQ62059 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.73□□□□□ -0.53
VcanQ62059 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.73□□□□□ -0.53
VcanQ62059 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Gm8756-201ENSMUST00000183250 929 ntBASIC11.73□□□□□ -0.53
VcanQ62059 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VcanQ62059 Gm7238-201ENSMUST00000206467 973 ntBASIC11.73□□□□□ -0.53
VcanQ62059 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Gm5455-201ENSMUST00000058710 715 ntBASIC11.73□□□□□ -0.53
VcanQ62059 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC11.73□□□□□ -0.53
VcanQ62059 Mir326-201ENSMUST00000083637 95 ntBASIC11.73□□□□□ -0.53
VcanQ62059 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VcanQ62059 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.72□□□□□ -0.53
VcanQ62059 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.72□□□□□ -0.53
VcanQ62059 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.72□□□□□ -0.53
VcanQ62059 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
VcanQ62059 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.72□□□□□ -0.53
VcanQ62059 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.72□□□□□ -0.53
VcanQ62059 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.72□□□□□ -0.53
VcanQ62059 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Gm25063-201ENSMUST00000104666 94 ntBASIC11.72□□□□□ -0.53
VcanQ62059 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Gm11942-201ENSMUST00000180255 345 ntBASIC11.72□□□□□ -0.53
VcanQ62059 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
VcanQ62059 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
VcanQ62059 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VcanQ62059 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.71□□□□□ -0.53
VcanQ62059 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
VcanQ62059 Gm6644-201ENSMUST00000186507 951 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms