Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ctr9Q62018 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.17■□□□□ 0.02
Ctr9Q62018 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctr9Q62018 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.16■□□□□ 0.02
Ctr9Q62018 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm14723-201ENSMUST00000118686 215 ntBASIC15.16■□□□□ 0.02
Ctr9Q62018 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm13316-201ENSMUST00000140537 691 ntBASIC15.16■□□□□ 0.02
Ctr9Q62018 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.16■□□□□ 0.02
Ctr9Q62018 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctr9Q62018 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.16■□□□□ 0.02
Ctr9Q62018 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.16■□□□□ 0.02
Ctr9Q62018 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.15■□□□□ 0.02
Ctr9Q62018 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.15■□□□□ 0.02
Ctr9Q62018 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Gm23363-201ENSMUST00000175024 79 ntBASIC15.15■□□□□ 0.02
Ctr9Q62018 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.15■□□□□ 0.02
Ctr9Q62018 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.15■□□□□ 0.02
Ctr9Q62018 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.15■□□□□ 0.02
Ctr9Q62018 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.15■□□□□ 0.02
Ctr9Q62018 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.15■□□□□ 0.02
Ctr9Q62018 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ctr9Q62018 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ctr9Q62018 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ctr9Q62018 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Ctr9Q62018 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ctr9Q62018 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ctr9Q62018 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Ctr9Q62018 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctr9Q62018 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ctr9Q62018 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ctr9Q62018 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Gm42706-201ENSMUST00000199733 1910 ntBASIC15.14■□□□□ 0.01
Ctr9Q62018 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms