Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ecm1Q61508 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm18734-201ENSMUST00000172937 808 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm29615-201ENSMUST00000185371 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm28224-201ENSMUST00000186078 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm29001-201ENSMUST00000186177 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm28292-201ENSMUST00000186593 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm28101-201ENSMUST00000187608 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm29076-201ENSMUST00000187689 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm28302-201ENSMUST00000187931 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm28646-201ENSMUST00000188220 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm28205-201ENSMUST00000189177 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm29032-201ENSMUST00000189797 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm28695-201ENSMUST00000190300 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm37448-201ENSMUST00000192795 697 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm7848-201ENSMUST00000210739 718 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.14□□□□□ -0.15
Ecm1Q61508 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ecm1Q61508 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ecm1Q61508 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm12380-201ENSMUST00000119012 544 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm9230-201ENSMUST00000188228 532 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.13□□□□□ -0.15
Ecm1Q61508 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ecm1Q61508 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ecm1Q61508 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ecm1Q61508 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms