Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ift88Q61371 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ift88Q61371 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ift88Q61371 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ift88Q61371 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ift88Q61371 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ift88Q61371 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.2□□□□□ -0.14
Ift88Q61371 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.2□□□□□ -0.14
Ift88Q61371 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm15429-201ENSMUST00000151268 798 ntBASIC14.2□□□□□ -0.14
Ift88Q61371 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Mir7654-201ENSMUST00000185082 70 ntBASIC14.2□□□□□ -0.14
Ift88Q61371 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.2□□□□□ -0.14
Ift88Q61371 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm44855-201ENSMUST00000205725 362 ntBASIC14.2□□□□□ -0.14
Ift88Q61371 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.2□□□□□ -0.14
Ift88Q61371 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm16372-201ENSMUST00000073088 450 ntBASIC14.2□□□□□ -0.14
Ift88Q61371 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ift88Q61371 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ift88Q61371 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.2□□□□□ -0.14
Ift88Q61371 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ift88Q61371 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Matn2-203ENSMUST00000226766 3252 ntBASIC14.19□□□□□ -0.14
Ift88Q61371 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.19□□□□□ -0.14
Ift88Q61371 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ift88Q61371 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.19□□□□□ -0.14
Ift88Q61371 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.19□□□□□ -0.14
Ift88Q61371 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ift88Q61371 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.19□□□□□ -0.14
Ift88Q61371 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.19□□□□□ -0.14
Ift88Q61371 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.19□□□□□ -0.14
Ift88Q61371 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.19□□□□□ -0.14
Ift88Q61371 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.19□□□□□ -0.14
Ift88Q61371 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.19□□□□□ -0.14
Ift88Q61371 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.19□□□□□ -0.14
Ift88Q61371 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.19□□□□□ -0.14
Ift88Q61371 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ift88Q61371 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ift88Q61371 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms