Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Six4Q61321 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Six4Q61321 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Six4Q61321 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.96□□□□□ -0.34
Six4Q61321 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Six4Q61321 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Six4Q61321 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Six4Q61321 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Six4Q61321 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Six4Q61321 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Six4Q61321 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Six4Q61321 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Six4Q61321 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.95□□□□□ -0.34
Six4Q61321 Gm8062-201ENSMUST00000139696 444 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Six4Q61321 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.95□□□□□ -0.34
Six4Q61321 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.95□□□□□ -0.34
Six4Q61321 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.95□□□□□ -0.34
Six4Q61321 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Six4Q61321 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Six4Q61321 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Six4Q61321 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Six4Q61321 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.94□□□□□ -0.34
Six4Q61321 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.94□□□□□ -0.34
Six4Q61321 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.94□□□□□ -0.34
Six4Q61321 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Six4Q61321 Gm37008-201ENSMUST00000195712 319 ntBASIC12.94□□□□□ -0.34
Six4Q61321 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.94□□□□□ -0.34
Six4Q61321 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.94□□□□□ -0.34
Six4Q61321 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.94□□□□□ -0.34
Six4Q61321 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.94□□□□□ -0.34
Six4Q61321 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Six4Q61321 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.94□□□□□ -0.34
Six4Q61321 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.94□□□□□ -0.34
Six4Q61321 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Six4Q61321 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Six4Q61321 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.93□□□□□ -0.34
Six4Q61321 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.93□□□□□ -0.34
Six4Q61321 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Six4Q61321 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.93□□□□□ -0.34
Six4Q61321 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms