Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.42■□□□□ 0.06
Mre11Q61216 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.42■□□□□ 0.06
Mre11Q61216 Gm12439-201ENSMUST00000117162 365 ntBASIC15.42■□□□□ 0.06
Mre11Q61216 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.42■□□□□ 0.06
Mre11Q61216 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.42■□□□□ 0.06
Mre11Q61216 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Mre11Q61216 Gm25911-201ENSMUST00000157621 56 ntBASIC15.42■□□□□ 0.06
Mre11Q61216 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Mre11Q61216 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.42■□□□□ 0.06
Mre11Q61216 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.42■□□□□ 0.06
Mre11Q61216 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.42■□□□□ 0.06
Mre11Q61216 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Mre11Q61216 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC15.42■□□□□ 0.06
Mre11Q61216 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC15.42■□□□□ 0.06
Mre11Q61216 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.42■□□□□ 0.06
Mre11Q61216 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mre11Q61216 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Mre11Q61216 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.41■□□□□ 0.06
Mre11Q61216 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Mre11Q61216 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Mre11Q61216 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Mre11Q61216 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.41■□□□□ 0.06
Mre11Q61216 Gm17271-201ENSMUST00000165535 355 ntBASIC15.41■□□□□ 0.06
Mre11Q61216 Gm29541-201ENSMUST00000191351 678 ntBASIC15.41■□□□□ 0.06
Mre11Q61216 Gm37935-201ENSMUST00000192012 982 ntBASIC15.41■□□□□ 0.06
Mre11Q61216 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.41■□□□□ 0.06
Mre11Q61216 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.41■□□□□ 0.06
Mre11Q61216 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC15.41■□□□□ 0.06
Mre11Q61216 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC15.41■□□□□ 0.06
Mre11Q61216 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mre11Q61216 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Mre11Q61216 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
Mre11Q61216 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.4■□□□□ 0.06
Mre11Q61216 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.4■□□□□ 0.06
Mre11Q61216 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.4■□□□□ 0.06
Mre11Q61216 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC15.4■□□□□ 0.06
Mre11Q61216 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Mre11Q61216 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.4■□□□□ 0.06
Mre11Q61216 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Gm43984-201ENSMUST00000204572 2864 ntBASIC15.4■□□□□ 0.06
Mre11Q61216 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mre11Q61216 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Mre11Q61216 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mre11Q61216 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mre11Q61216 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mre11Q61216 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mre11Q61216 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mre11Q61216 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mre11Q61216 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.39■□□□□ 0.05
Mre11Q61216 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mre11Q61216 Gm8227-201ENSMUST00000223306 571 ntBASIC15.39■□□□□ 0.05
Mre11Q61216 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC15.39■□□□□ 0.05
Mre11Q61216 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms