Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ClpbQ60649 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.36□□□□□ -0.43
ClpbQ60649 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
ClpbQ60649 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
ClpbQ60649 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ClpbQ60649 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
ClpbQ60649 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
ClpbQ60649 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Gm6447-201ENSMUST00000118905 835 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 Gm12384-201ENSMUST00000119228 919 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 Mir1938-201ENSMUST00000158746 100 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
ClpbQ60649 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.35□□□□□ -0.43
ClpbQ60649 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ClpbQ60649 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.35□□□□□ -0.43
ClpbQ60649 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
ClpbQ60649 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ClpbQ60649 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ClpbQ60649 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClpbQ60649 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.34□□□□□ -0.43
ClpbQ60649 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Gm4271-201ENSMUST00000174444 973 ntBASIC12.34□□□□□ -0.43
ClpbQ60649 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.34□□□□□ -0.43
ClpbQ60649 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClpbQ60649 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ClpbQ60649 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.34□□□□□ -0.43
ClpbQ60649 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ClpbQ60649 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClpbQ60649 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
ClpbQ60649 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms