Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Matn2-206ENSMUST00000228570 2798 ntBASIC11.84□□□□□ -0.51
Urb1Q571H0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.84□□□□□ -0.51
Urb1Q571H0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Gm19459-201ENSMUST00000176240 835 ntBASIC11.84□□□□□ -0.51
Urb1Q571H0 Gm7003-201ENSMUST00000195089 312 ntBASIC11.84□□□□□ -0.51
Urb1Q571H0 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.84□□□□□ -0.51
Urb1Q571H0 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.84□□□□□ -0.51
Urb1Q571H0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.84□□□□□ -0.51
Urb1Q571H0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.83□□□□□ -0.52
Urb1Q571H0 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Urb1Q571H0 Gm45770-201ENSMUST00000212105 616 ntBASIC11.83□□□□□ -0.52
Urb1Q571H0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.83□□□□□ -0.52
Urb1Q571H0 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.83□□□□□ -0.52
Urb1Q571H0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.83□□□□□ -0.52
Urb1Q571H0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Urb1Q571H0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Urb1Q571H0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.83□□□□□ -0.52
Urb1Q571H0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.83□□□□□ -0.52
Urb1Q571H0 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.83□□□□□ -0.52
Urb1Q571H0 Gm13813-201ENSMUST00000120998 787 ntBASIC11.83□□□□□ -0.52
Urb1Q571H0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Urb1Q571H0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.83□□□□□ -0.52
Urb1Q571H0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.83□□□□□ -0.52
Urb1Q571H0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.83□□□□□ -0.52
Urb1Q571H0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Urb1Q571H0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Urb1Q571H0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.82□□□□□ -0.52
Urb1Q571H0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.82□□□□□ -0.52
Urb1Q571H0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.82□□□□□ -0.52
Urb1Q571H0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Urb1Q571H0 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.82□□□□□ -0.52
Urb1Q571H0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.82□□□□□ -0.52
Urb1Q571H0 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.82□□□□□ -0.52
Urb1Q571H0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Urb1Q571H0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Urb1Q571H0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms