Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trim43aQ3TL54 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim43aQ3TL54 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.64□□□□□ -0.23
Trim43aQ3TL54 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Gm12859-201ENSMUST00000117834 427 ntBASIC13.64□□□□□ -0.23
Trim43aQ3TL54 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43aQ3TL54 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Gm9797-201ENSMUST00000052902 613 ntBASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43aQ3TL54 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms