Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim63Q38HM4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trim63Q38HM4 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.52□□□□□ -0.72
Trim63Q38HM4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim63Q38HM4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.52□□□□□ -0.72
Trim63Q38HM4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trim63Q38HM4 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Trim63Q38HM4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim63Q38HM4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trim63Q38HM4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gm9484-201ENSMUST00000195892 1159 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gm10252-201ENSMUST00000209541 832 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trim63Q38HM4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.52□□□□□ -0.73
Trim63Q38HM4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim63Q38HM4 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm15165-201ENSMUST00000118140 502 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Mir7071-201ENSMUST00000184847 69 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm7063-201ENSMUST00000186840 981 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm9682-201ENSMUST00000197505 556 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm45328-201ENSMUST00000210942 917 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm6296-201ENSMUST00000222599 943 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms