Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Cd9-ps-201ENSMUST00000174687 650 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 AC166361.2-201ENSMUST00000219269 1415 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm22344-201ENSMUST00000122642 278 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 n-R5s71-201ENSMUST00000093668 119 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm15570-201ENSMUST00000122093 625 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Zfp419-201ENSMUST00000173446 916 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Mir6359-201ENSMUST00000183668 81 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm44891-201ENSMUST00000208817 2223 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm43671-201ENSMUST00000200422 433 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 AC112945.1-201ENSMUST00000226413 514 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 AC164978.2-201ENSMUST00000226645 857 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Olfr584-201ENSMUST00000098210 964 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Gm37305-201ENSMUST00000195714 4279 ntBASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ush2AQ2QI47 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm14921-201ENSMUST00000118643 908 ntBASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm19015-201ENSMUST00000184002 1189 ntBASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm23912-201ENSMUST00000104687 87 ntBASIC6.57□□□□□ -1.36
Ush2AQ2QI47 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 AC139350.1-201ENSMUST00000227064 1594 ntBASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm45133-201ENSMUST00000207548 2773 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms