Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm12997-201ENSMUST00000120207 640 ntBASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm13315-201ENSMUST00000120376 991 ntBASIC13.89□□□□□ -0.19
Col9a2Q07643 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Col9a2Q07643 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm2383-201ENSMUST00000181461 807 ntBASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 AA914427-201ENSMUST00000193194 1166 ntBASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm31256-201ENSMUST00000194705 506 ntBASIC13.89□□□□□ -0.19
Col9a2Q07643 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm45224-201ENSMUST00000208203 414 ntBASIC13.89□□□□□ -0.19
Col9a2Q07643 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.89□□□□□ -0.19
Col9a2Q07643 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm13492-201ENSMUST00000119772 665 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm8018-201ENSMUST00000173536 789 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm8885-201ENSMUST00000189382 598 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Col9a2Q07643 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.88□□□□□ -0.19
Col9a2Q07643 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a2Q07643 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm24830-201ENSMUST00000102024 166 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms