Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.26□□□□□ -0.29
Sox9Q04887 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Sox9Q04887 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox9Q04887 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox9Q04887 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sox9Q04887 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.26□□□□□ -0.29
Sox9Q04887 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox9Q04887 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox9Q04887 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox9Q04887 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox9Q04887 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox9Q04887 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox9Q04887 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox9Q04887 Gm14058-201ENSMUST00000116082 735 ntBASIC13.25□□□□□ -0.29
Sox9Q04887 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.25□□□□□ -0.29
Sox9Q04887 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox9Q04887 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox9Q04887 Gm28324-201ENSMUST00000187913 264 ntBASIC13.25□□□□□ -0.29
Sox9Q04887 Gm28071-201ENSMUST00000190355 478 ntBASIC13.25□□□□□ -0.29
Sox9Q04887 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox9Q04887 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.25□□□□□ -0.29
Sox9Q04887 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox9Q04887 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox9Q04887 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox9Q04887 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox9Q04887 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Sox9Q04887 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.24□□□□□ -0.29
Sox9Q04887 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sox9Q04887 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox9Q04887 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Gm15515-201ENSMUST00000117827 822 ntBASIC13.24□□□□□ -0.29
Sox9Q04887 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox9Q04887 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.24□□□□□ -0.29
Sox9Q04887 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox9Q04887 AY036118-201ENSMUST00000200021 923 ntBASIC13.24□□□□□ -0.29
Sox9Q04887 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox9Q04887 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.24□□□□□ -0.29
Sox9Q04887 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.24□□□□□ -0.29
Sox9Q04887 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox9Q04887 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox9Q04887 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox9Q04887 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Sox9Q04887 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms