Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Rubie-203ENSMUST00000227803 2430 ntBASIC12.5□□□□□ -0.41
Mmp11Q02853 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.5□□□□□ -0.41
Mmp11Q02853 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.5□□□□□ -0.41
Mmp11Q02853 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Gm8099-201ENSMUST00000200510 742 ntBASIC12.5□□□□□ -0.41
Mmp11Q02853 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Mmp11Q02853 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp11Q02853 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Mmp11Q02853 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Mmp11Q02853 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.49□□□□□ -0.41
Mmp11Q02853 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Mmp11Q02853 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.49□□□□□ -0.41
Mmp11Q02853 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.49□□□□□ -0.41
Mmp11Q02853 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.49□□□□□ -0.41
Mmp11Q02853 Gm23363-201ENSMUST00000175024 79 ntBASIC12.49□□□□□ -0.41
Mmp11Q02853 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.49□□□□□ -0.41
Mmp11Q02853 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.49□□□□□ -0.41
Mmp11Q02853 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Mmp11Q02853 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.49□□□□□ -0.41
Mmp11Q02853 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mmp11Q02853 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp11Q02853 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Mmp11Q02853 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms