Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.09□□□□□ -0.31
Thumpd3P97770 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.09□□□□□ -0.31
Thumpd3P97770 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm27892-201ENSMUST00000185017 106 ntBASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.09□□□□□ -0.31
Thumpd3P97770 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd3P97770 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Thumpd3P97770 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Thumpd3P97770 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Thumpd3P97770 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Thumpd3P97770 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.08□□□□□ -0.32
Thumpd3P97770 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.08□□□□□ -0.32
Thumpd3P97770 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Thumpd3P97770 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.08□□□□□ -0.32
Thumpd3P97770 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Gm43094-201ENSMUST00000196549 921 ntBASIC13.08□□□□□ -0.32
Thumpd3P97770 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Thumpd3P97770 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.08□□□□□ -0.32
Thumpd3P97770 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd3P97770 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Thumpd3P97770 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd3P97770 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd3P97770 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd3P97770 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd3P97770 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Thumpd3P97770 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd3P97770 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms