Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mir686-201ENSMUST00000102174 109 ntBASIC12.17□□□□□ -0.46
Nkx3-2P97503 Gm16479-201ENSMUST00000121706 932 ntBASIC12.17□□□□□ -0.46
Nkx3-2P97503 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Mir6420-201ENSMUST00000185032 102 ntBASIC12.17□□□□□ -0.46
Nkx3-2P97503 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Gm43133-201ENSMUST00000197472 463 ntBASIC12.17□□□□□ -0.46
Nkx3-2P97503 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx3-2P97503 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.16□□□□□ -0.46
Nkx3-2P97503 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.16□□□□□ -0.46
Nkx3-2P97503 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.16□□□□□ -0.46
Nkx3-2P97503 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.16□□□□□ -0.46
Nkx3-2P97503 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.16□□□□□ -0.46
Nkx3-2P97503 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.16□□□□□ -0.46
Nkx3-2P97503 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.16□□□□□ -0.46
Nkx3-2P97503 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkx3-2P97503 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Gm11793-201ENSMUST00000120433 981 ntBASIC12.15□□□□□ -0.46
Nkx3-2P97503 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms