Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.23■□□□□ 0.35
Nphp4P59240 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nphp4P59240 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.22■□□□□ 0.35
Nphp4P59240 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.22■□□□□ 0.35
Nphp4P59240 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Nphp4P59240 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nphp4P59240 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.22■□□□□ 0.35
Nphp4P59240 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nphp4P59240 CU062626.3-201ENSMUST00000225522 1411 ntBASIC17.22■□□□□ 0.35
Nphp4P59240 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nphp4P59240 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nphp4P59240 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC17.22■□□□□ 0.35
Nphp4P59240 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC17.21■□□□□ 0.35
Nphp4P59240 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC17.21■□□□□ 0.35
Nphp4P59240 B9d1os-201ENSMUST00000137010 674 ntBASIC17.21■□□□□ 0.35
Nphp4P59240 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nphp4P59240 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.21■□□□□ 0.35
Nphp4P59240 Gm27552-201ENSMUST00000183351 62 ntBASIC17.21■□□□□ 0.35
Nphp4P59240 Gm27844-201ENSMUST00000183613 62 ntBASIC17.21■□□□□ 0.35
Nphp4P59240 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC17.21■□□□□ 0.35
Nphp4P59240 CT025694.1-201ENSMUST00000226188 934 ntBASIC17.21■□□□□ 0.35
Nphp4P59240 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC17.21■□□□□ 0.35
Nphp4P59240 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC17.21■□□□□ 0.35
Nphp4P59240 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nphp4P59240 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nphp4P59240 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nphp4P59240 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC17.21■□□□□ 0.34
Nphp4P59240 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Nphp4P59240 Gm18753-201ENSMUST00000201000 566 ntBASIC17.21■□□□□ 0.34
Nphp4P59240 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nphp4P59240 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC17.21■□□□□ 0.34
Nphp4P59240 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.2■□□□□ 0.34
Nphp4P59240 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Nphp4P59240 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nphp4P59240 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.2■□□□□ 0.34
Nphp4P59240 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Gm18227-201ENSMUST00000211082 1468 ntBASIC17.2■□□□□ 0.34
Nphp4P59240 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.2■□□□□ 0.34
Nphp4P59240 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Nphp4P59240 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nphp4P59240 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC17.2■□□□□ 0.34
Nphp4P59240 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 Mir6979-201ENSMUST00000183927 56 ntBASIC17.2■□□□□ 0.34
Nphp4P59240 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC17.2■□□□□ 0.34
Nphp4P59240 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nphp4P59240 AY036118-201ENSMUST00000200021 923 ntBASIC17.2■□□□□ 0.34
Nphp4P59240 Gm43962-201ENSMUST00000203898 190 ntBASIC17.2■□□□□ 0.34
Nphp4P59240 Gm19208-201ENSMUST00000213861 912 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms