Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.35□□□□□ -0.11
Tpm1P58771 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.35□□□□□ -0.11
Tpm1P58771 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Tpm1P58771 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.34□□□□□ -0.11
Tpm1P58771 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.34□□□□□ -0.11
Tpm1P58771 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.34□□□□□ -0.11
Tpm1P58771 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.34□□□□□ -0.11
Tpm1P58771 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Gm22175-201ENSMUST00000175007 78 ntBASIC14.34□□□□□ -0.11
Tpm1P58771 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Gm27618-201ENSMUST00000183671 60 ntBASIC14.34□□□□□ -0.11
Tpm1P58771 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.34□□□□□ -0.11
Tpm1P58771 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tpm1P58771 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.34□□□□□ -0.11
Tpm1P58771 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.34□□□□□ -0.11
Tpm1P58771 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tpm1P58771 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.34□□□□□ -0.11
Tpm1P58771 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm1P58771 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.34□□□□□ -0.11
Tpm1P58771 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Tpm1P58771 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tpm1P58771 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tpm1P58771 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.33□□□□□ -0.11
Tpm1P58771 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tpm1P58771 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Tpm1P58771 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Tpm1P58771 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tpm1P58771 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.33□□□□□ -0.12
Tpm1P58771 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Tpm1P58771 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.33□□□□□ -0.12
Tpm1P58771 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.33□□□□□ -0.12
Tpm1P58771 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.33□□□□□ -0.12
Tpm1P58771 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.33□□□□□ -0.12
Tpm1P58771 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.33□□□□□ -0.12
Tpm1P58771 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.33□□□□□ -0.12
Tpm1P58771 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm1P58771 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.33□□□□□ -0.12
Tpm1P58771 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tpm1P58771 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm1P58771 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm1P58771 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.32□□□□□ -0.12
Tpm1P58771 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.32□□□□□ -0.12
Tpm1P58771 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.32□□□□□ -0.12
Tpm1P58771 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm1P58771 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tpm1P58771 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.32□□□□□ -0.12
Tpm1P58771 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.32□□□□□ -0.12
Tpm1P58771 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.32□□□□□ -0.12
Tpm1P58771 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.32□□□□□ -0.12
Tpm1P58771 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm1P58771 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms