Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atxn1P54254 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.78□□□□□ -0.36
Atxn1P54254 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Gm23200-201ENSMUST00000104379 132 ntBASIC12.78□□□□□ -0.36
Atxn1P54254 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Gm13611-201ENSMUST00000118269 318 ntBASIC12.78□□□□□ -0.36
Atxn1P54254 Gm13665-201ENSMUST00000120830 528 ntBASIC12.78□□□□□ -0.36
Atxn1P54254 Gm44069-201ENSMUST00000204898 506 ntBASIC12.78□□□□□ -0.36
Atxn1P54254 Gm4768-201ENSMUST00000206199 686 ntBASIC12.78□□□□□ -0.36
Atxn1P54254 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.78□□□□□ -0.36
Atxn1P54254 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.78□□□□□ -0.36
Atxn1P54254 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Atxn1P54254 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Atxn1P54254 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Atxn1P54254 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.78□□□□□ -0.36
Atxn1P54254 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Atxn1P54254 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Atxn1P54254 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.78□□□□□ -0.36
Atxn1P54254 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Atxn1P54254 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
Atxn1P54254 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Atxn1P54254 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atxn1P54254 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atxn1P54254 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.77□□□□□ -0.36
Atxn1P54254 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atxn1P54254 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Atxn1P54254 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atxn1P54254 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atxn1P54254 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atxn1P54254 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Atxn1P54254 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.77□□□□□ -0.36
Atxn1P54254 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.77□□□□□ -0.36
Atxn1P54254 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Snord83b-201ENSMUST00000104546 94 ntBASIC12.77□□□□□ -0.37
Atxn1P54254 Gm11637-201ENSMUST00000120601 592 ntBASIC12.77□□□□□ -0.37
Atxn1P54254 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Atxn1P54254 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Gm44262-201ENSMUST00000204969 372 ntBASIC12.77□□□□□ -0.37
Atxn1P54254 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.77□□□□□ -0.37
Atxn1P54254 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.77□□□□□ -0.37
Atxn1P54254 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.77□□□□□ -0.37
Atxn1P54254 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Atxn1P54254 Gm8385-201ENSMUST00000058999 643 ntBASIC12.77□□□□□ -0.37
Atxn1P54254 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Atxn1P54254 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.77□□□□□ -0.37
Atxn1P54254 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.77□□□□□ -0.37
Atxn1P54254 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.77□□□□□ -0.37
Atxn1P54254 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Atxn1P54254 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.77□□□□□ -0.37
Atxn1P54254 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atxn1P54254 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms