Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brca1P48754 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.15□□□□□ -0.14
Brca1P48754 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Brca1P48754 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Brca1P48754 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Brca1P48754 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.15□□□□□ -0.14
Brca1P48754 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.15□□□□□ -0.14
Brca1P48754 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brca1P48754 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca1P48754 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Brca1P48754 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.14□□□□□ -0.15
Brca1P48754 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.14□□□□□ -0.15
Brca1P48754 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.14□□□□□ -0.15
Brca1P48754 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Brca1P48754 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Brca1P48754 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Brca1P48754 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca1P48754 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.14□□□□□ -0.15
Brca1P48754 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Brca1P48754 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Brca1P48754 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.13□□□□□ -0.15
Brca1P48754 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
Brca1P48754 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.13□□□□□ -0.15
Brca1P48754 Gm11451-201ENSMUST00000118946 630 ntBASIC14.13□□□□□ -0.15
Brca1P48754 Gm15595-201ENSMUST00000120840 961 ntBASIC14.13□□□□□ -0.15
Brca1P48754 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.13□□□□□ -0.15
Brca1P48754 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.13□□□□□ -0.15
Brca1P48754 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Gm43520-201ENSMUST00000197996 164 ntBASIC14.13□□□□□ -0.15
Brca1P48754 Gm3793-201ENSMUST00000204973 672 ntBASIC14.13□□□□□ -0.15
Brca1P48754 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.13□□□□□ -0.15
Brca1P48754 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Brca1P48754 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.13□□□□□ -0.15
Brca1P48754 Gm23596-201ENSMUST00000104304 132 ntBASIC14.13□□□□□ -0.15
Brca1P48754 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms