Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Rfx2P48379 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfx2P48379 Gm44364-201ENSMUST00000198368 141 ntBASIC13.48□□□□□ -0.25
Rfx2P48379 Gm18935-201ENSMUST00000212692 664 ntBASIC13.48□□□□□ -0.25
Rfx2P48379 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.48□□□□□ -0.25
Rfx2P48379 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rfx2P48379 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Rfx2P48379 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.48□□□□□ -0.25
Rfx2P48379 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfx2P48379 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfx2P48379 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rfx2P48379 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rfx2P48379 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.47□□□□□ -0.25
Rfx2P48379 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rfx2P48379 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Gm11793-201ENSMUST00000120433 981 ntBASIC13.47□□□□□ -0.25
Rfx2P48379 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.47□□□□□ -0.25
Rfx2P48379 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Gm19163-201ENSMUST00000223313 780 ntBASIC13.47□□□□□ -0.25
Rfx2P48379 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.47□□□□□ -0.25
Rfx2P48379 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.47□□□□□ -0.25
Rfx2P48379 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rfx2P48379 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rfx2P48379 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.47□□□□□ -0.25
Rfx2P48379 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfx2P48379 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Rfx2P48379 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.46□□□□□ -0.25
Rfx2P48379 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.46□□□□□ -0.25
Rfx2P48379 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.46□□□□□ -0.25
Rfx2P48379 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.46□□□□□ -0.25
Rfx2P48379 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Gm28693-202ENSMUST00000190758 331 ntBASIC13.46□□□□□ -0.25
Rfx2P48379 Gm9368-201ENSMUST00000219348 831 ntBASIC13.46□□□□□ -0.25
Rfx2P48379 Gm9257-201ENSMUST00000221254 232 ntBASIC13.46□□□□□ -0.25
Rfx2P48379 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Rfx2P48379 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rfx2P48379 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx2P48379 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx2P48379 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.46□□□□□ -0.26
Rfx2P48379 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx2P48379 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx2P48379 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx2P48379 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx2P48379 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rfx2P48379 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rfx2P48379 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.45□□□□□ -0.26
Rfx2P48379 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms