Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm6447-201ENSMUST00000118905 835 ntBASIC12.43□□□□□ -0.42
Sox18P43680 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Gm25109-201ENSMUST00000122474 114 ntBASIC12.43□□□□□ -0.42
Sox18P43680 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox18P43680 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Sox18P43680 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox18P43680 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox18P43680 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox18P43680 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Sox18P43680 Gm8581-201ENSMUST00000188636 890 ntBASIC12.43□□□□□ -0.42
Sox18P43680 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox18P43680 Gm28693-202ENSMUST00000190758 331 ntBASIC12.43□□□□□ -0.42
Sox18P43680 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox18P43680 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox18P43680 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.43□□□□□ -0.42
Sox18P43680 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.43□□□□□ -0.42
Sox18P43680 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox18P43680 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox18P43680 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Sox18P43680 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.42□□□□□ -0.42
Sox18P43680 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox18P43680 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.42□□□□□ -0.42
Sox18P43680 Gm9440-201ENSMUST00000119667 539 ntBASIC12.42□□□□□ -0.42
Sox18P43680 Gm12502-201ENSMUST00000120197 444 ntBASIC12.42□□□□□ -0.42
Sox18P43680 Gm11597-201ENSMUST00000121423 964 ntBASIC12.42□□□□□ -0.42
Sox18P43680 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox18P43680 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox18P43680 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox18P43680 Gm5070-201ENSMUST00000177599 862 ntBASIC12.42□□□□□ -0.42
Sox18P43680 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Gm2546-201ENSMUST00000182630 991 ntBASIC12.42□□□□□ -0.42
Sox18P43680 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox18P43680 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox18P43680 Gm45219-201ENSMUST00000205602 465 ntBASIC12.42□□□□□ -0.42
Sox18P43680 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.42□□□□□ -0.42
Sox18P43680 CT009711.2-202ENSMUST00000224538 973 ntBASIC12.42□□□□□ -0.42
Sox18P43680 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.42□□□□□ -0.42
Sox18P43680 CT025525.1-201ENSMUST00000226325 1054 ntBASIC12.42□□□□□ -0.42
Sox18P43680 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.42□□□□□ -0.42
Sox18P43680 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox18P43680 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox18P43680 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.42□□□□□ -0.42
Sox18P43680 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox18P43680 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox18P43680 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox18P43680 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
Sox18P43680 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox18P43680 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms