Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HttP42859 Gm11500-201ENSMUST00000118237 601 ntBASIC13.26□□□□□ -0.29
HttP42859 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Gm45310-201ENSMUST00000210436 275 ntBASIC13.26□□□□□ -0.29
HttP42859 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.26□□□□□ -0.29
HttP42859 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.25□□□□□ -0.29
HttP42859 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
HttP42859 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Gm12712-201ENSMUST00000120676 801 ntBASIC13.25□□□□□ -0.29
HttP42859 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.25□□□□□ -0.29
HttP42859 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.25□□□□□ -0.29
HttP42859 Gm19931-201ENSMUST00000198920 368 ntBASIC13.25□□□□□ -0.29
HttP42859 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.25□□□□□ -0.29
HttP42859 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.25□□□□□ -0.29
HttP42859 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HttP42859 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.25□□□□□ -0.29
HttP42859 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
HttP42859 Gm22146-201ENSMUST00000157397 288 ntBASIC13.25□□□□□ -0.29
HttP42859 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.25□□□□□ -0.29
HttP42859 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
HttP42859 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.25□□□□□ -0.29
HttP42859 Gm43854-201ENSMUST00000200418 394 ntBASIC13.25□□□□□ -0.29
HttP42859 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.25□□□□□ -0.29
HttP42859 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HttP42859 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HttP42859 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.25□□□□□ -0.29
HttP42859 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HttP42859 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.25□□□□□ -0.29
HttP42859 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
HttP42859 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Gm12663-201ENSMUST00000118481 958 ntBASIC13.24□□□□□ -0.29
HttP42859 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.24□□□□□ -0.29
HttP42859 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.24□□□□□ -0.29
HttP42859 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.24□□□□□ -0.29
HttP42859 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.24□□□□□ -0.29
HttP42859 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HttP42859 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC13.24□□□□□ -0.29
HttP42859 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Gm29763-201ENSMUST00000205306 616 ntBASIC13.24□□□□□ -0.29
HttP42859 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HttP42859 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HttP42859 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HttP42859 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
HttP42859 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HttP42859 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HttP42859 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.23□□□□□ -0.29
HttP42859 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.23□□□□□ -0.29
HttP42859 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms