Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Mmp9P41245 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Gm9824-201ENSMUST00000178707 561 ntBASIC10.82□□□□□ -0.68
Mmp9P41245 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Gm43433-201ENSMUST00000196573 481 ntBASIC10.82□□□□□ -0.68
Mmp9P41245 Gm6888-201ENSMUST00000221983 706 ntBASIC10.82□□□□□ -0.68
Mmp9P41245 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Mmp9P41245 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.82□□□□□ -0.68
Mmp9P41245 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.82□□□□□ -0.68
Mmp9P41245 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.82□□□□□ -0.68
Mmp9P41245 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Mmp9P41245 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.82□□□□□ -0.68
Mmp9P41245 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.82□□□□□ -0.68
Mmp9P41245 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mmp9P41245 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Mmp9P41245 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.81□□□□□ -0.68
Mmp9P41245 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Mmp9P41245 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm13015-201ENSMUST00000118674 204 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm24420-201ENSMUST00000176676 59 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 Gm27306-201ENSMUST00000183970 107 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Mmp9P41245 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 Dupd1-202ENSMUST00000224735 548 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.81□□□□□ -0.68
Mmp9P41245 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Mmp9P41245 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.81□□□□□ -0.68
Mmp9P41245 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mmp9P41245 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Mmp9P41245 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Mmp9P41245 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.8□□□□□ -0.68
Mmp9P41245 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.8□□□□□ -0.68
Mmp9P41245 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.8□□□□□ -0.68
Mmp9P41245 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mmp9P41245 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.8□□□□□ -0.68
Mmp9P41245 Gm7488-201ENSMUST00000117148 684 ntBASIC10.8□□□□□ -0.68
Mmp9P41245 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.8□□□□□ -0.68
Mmp9P41245 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms