Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PtprkP35822 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PtprkP35822 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC20.06■□□□□ 0.8
PtprkP35822 Gm12501-201ENSMUST00000119163 529 ntBASIC20.06■□□□□ 0.8
PtprkP35822 Gm8199-201ENSMUST00000121323 823 ntBASIC20.06■□□□□ 0.8
PtprkP35822 Gm14760-201ENSMUST00000121831 999 ntBASIC20.06■□□□□ 0.8
PtprkP35822 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PtprkP35822 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PtprkP35822 Gm5733-201ENSMUST00000190232 939 ntBASIC20.06■□□□□ 0.8
PtprkP35822 Gm37246-201ENSMUST00000192665 835 ntBASIC20.06■□□□□ 0.8
PtprkP35822 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PtprkP35822 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtprkP35822 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC20.05■□□□□ 0.8
PtprkP35822 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC20.05■□□□□ 0.8
PtprkP35822 Gm25881-201ENSMUST00000157783 103 ntBASIC20.05■□□□□ 0.8
PtprkP35822 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC20.05■□□□□ 0.8
PtprkP35822 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC20.05■□□□□ 0.8
PtprkP35822 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PtprkP35822 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PtprkP35822 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Mup-ps26-201ENSMUST00000121751 202 ntBASIC20.05■□□□□ 0.8
PtprkP35822 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC20.05■□□□□ 0.8
PtprkP35822 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC20.05■□□□□ 0.8
PtprkP35822 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC20.05■□□□□ 0.8
PtprkP35822 Gm9132-201ENSMUST00000210182 832 ntBASIC20.05■□□□□ 0.8
PtprkP35822 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC20.05■□□□□ 0.8
PtprkP35822 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Gm43045-201ENSMUST00000198725 2095 ntBASIC20.05■□□□□ 0.8
PtprkP35822 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtprkP35822 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Gm10176-201ENSMUST00000159707 2264 ntBASIC20.04■□□□□ 0.8
PtprkP35822 Gm19863-201ENSMUST00000192480 2218 ntBASIC20.04■□□□□ 0.8
PtprkP35822 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PtprkP35822 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC20.04■□□□□ 0.8
PtprkP35822 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PtprkP35822 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC20.04■□□□□ 0.8
PtprkP35822 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC20.04■□□□□ 0.8
PtprkP35822 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC20.04■□□□□ 0.8
PtprkP35822 Gm44958-201ENSMUST00000203734 736 ntBASIC20.04■□□□□ 0.8
PtprkP35822 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC20.04■□□□□ 0.8
PtprkP35822 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC20.04■□□□□ 0.8
PtprkP35822 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC20.04■□□□□ 0.8
PtprkP35822 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC20.04■□□□□ 0.8
PtprkP35822 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PtprkP35822 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC20.03■□□□□ 0.8
PtprkP35822 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Gm12948-201ENSMUST00000119406 682 ntBASIC20.03■□□□□ 0.8
PtprkP35822 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC20.03■□□□□ 0.8
PtprkP35822 Gm5621-201ENSMUST00000187303 640 ntBASIC20.03■□□□□ 0.8
PtprkP35822 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtprkP35822 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PtprkP35822 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms