Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Foxa1P35582 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Foxa1P35582 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.88□□□□□ -0.51
Foxa1P35582 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Snord83b-201ENSMUST00000104546 94 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.88□□□□□ -0.51
Foxa1P35582 Gm13813-201ENSMUST00000120998 787 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.88□□□□□ -0.51
Foxa1P35582 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.88□□□□□ -0.51
Foxa1P35582 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.88□□□□□ -0.51
Foxa1P35582 Gm32025-201ENSMUST00000217960 307 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Foxa1P35582 Mir339-201ENSMUST00000083659 96 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.88□□□□□ -0.51
Foxa1P35582 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Foxa1P35582 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.87□□□□□ -0.51
Foxa1P35582 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Gm14127-201ENSMUST00000117906 678 ntBASIC11.87□□□□□ -0.51
Foxa1P35582 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Foxa1P35582 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.87□□□□□ -0.51
Foxa1P35582 Gm23363-201ENSMUST00000175024 79 ntBASIC11.87□□□□□ -0.51
Foxa1P35582 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Gm8099-201ENSMUST00000200510 742 ntBASIC11.87□□□□□ -0.51
Foxa1P35582 Gm18062-201ENSMUST00000208020 547 ntBASIC11.87□□□□□ -0.51
Foxa1P35582 Gm18055-201ENSMUST00000208254 547 ntBASIC11.87□□□□□ -0.51
Foxa1P35582 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.87□□□□□ -0.51
Foxa1P35582 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.87□□□□□ -0.51
Foxa1P35582 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Foxa1P35582 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Foxa1P35582 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Foxa1P35582 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Foxa1P35582 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Foxa1P35582 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms