Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
P20040 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.43□□□□□ -0.58
P20040 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
P20040 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
P20040 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
P20040 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
P20040 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P20040 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
P20040 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P20040 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
P20040 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
P20040 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P20040 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.42□□□□□ -0.58
P20040 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
P20040 Mir1894-201ENSMUST00000122802 81 ntBASIC11.42□□□□□ -0.58
P20040 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.42□□□□□ -0.58
P20040 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.42□□□□□ -0.58
P20040 Gm27892-201ENSMUST00000185017 106 ntBASIC11.42□□□□□ -0.58
P20040 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.42□□□□□ -0.58
P20040 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.42□□□□□ -0.58
P20040 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.42□□□□□ -0.58
P20040 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.42□□□□□ -0.58
P20040 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.42□□□□□ -0.58
P20040 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
P20040 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.42□□□□□ -0.58
P20040 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.42□□□□□ -0.58
P20040 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
P20040 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.42□□□□□ -0.58
P20040 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.42□□□□□ -0.58
P20040 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
P20040 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
P20040 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P20040 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.41□□□□□ -0.58
P20040 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
P20040 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.41□□□□□ -0.58
P20040 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P20040 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.41□□□□□ -0.58
P20040 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.41□□□□□ -0.58
P20040 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms