Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Gm29608-201ENSMUST00000190444 463 ntBASIC11.66□□□□□ -0.54
TpbpaP13438 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TpbpaP13438 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.66□□□□□ -0.54
TpbpaP13438 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TpbpaP13438 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.66□□□□□ -0.54
TpbpaP13438 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
TpbpaP13438 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.66□□□□□ -0.54
TpbpaP13438 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.66□□□□□ -0.54
TpbpaP13438 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
TpbpaP13438 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TpbpaP13438 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
TpbpaP13438 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
TpbpaP13438 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.65□□□□□ -0.54
TpbpaP13438 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.65□□□□□ -0.54
TpbpaP13438 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.65□□□□□ -0.54
TpbpaP13438 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.65□□□□□ -0.54
TpbpaP13438 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
TpbpaP13438 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.65□□□□□ -0.54
TpbpaP13438 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
TpbpaP13438 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.65□□□□□ -0.54
TpbpaP13438 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.65□□□□□ -0.54
TpbpaP13438 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.65□□□□□ -0.54
TpbpaP13438 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
TpbpaP13438 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.65□□□□□ -0.54
TpbpaP13438 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TpbpaP13438 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TpbpaP13438 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
TpbpaP13438 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
TpbpaP13438 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.65□□□□□ -0.55
TpbpaP13438 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.65□□□□□ -0.55
TpbpaP13438 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
TpbpaP13438 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.64□□□□□ -0.55
TpbpaP13438 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
TpbpaP13438 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
TpbpaP13438 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.64□□□□□ -0.55
TpbpaP13438 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Mir6956-201ENSMUST00000183598 62 ntBASIC11.64□□□□□ -0.55
TpbpaP13438 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.64□□□□□ -0.55
TpbpaP13438 Gm19078-201ENSMUST00000206311 727 ntBASIC11.64□□□□□ -0.55
TpbpaP13438 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
TpbpaP13438 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
TpbpaP13438 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
TpbpaP13438 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
TpbpaP13438 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TpbpaP13438 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.64□□□□□ -0.55
TpbpaP13438 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
TpbpaP13438 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TpbpaP13438 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
TpbpaP13438 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms