Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Gm8805-201ENSMUST00000117848 313 ntBASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Gm37922-201ENSMUST00000195596 455 ntBASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Gm29705-201ENSMUST00000212598 474 ntBASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Gm25857-201ENSMUST00000082788 129 ntBASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp6P0C0A3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Gm27331-201ENSMUST00000183705 60 ntBASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp6P0C0A3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14□□□□□ -0.17
Chmp6P0C0A3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Gm26616-202ENSMUST00000195676 3107 ntBASIC14□□□□□ -0.17
Chmp6P0C0A3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14□□□□□ -0.17
Chmp6P0C0A3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Gm40466-201ENSMUST00000212174 422 ntBASIC14□□□□□ -0.17
Chmp6P0C0A3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp6P0C0A3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp6P0C0A3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms