Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC8.11□□□□□ -1.11
P06320 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC8.11□□□□□ -1.11
P06320 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P06320 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC8.11□□□□□ -1.11
P06320 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC8.11□□□□□ -1.11
P06320 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Gm43721-201ENSMUST00000199677 2313 ntBASIC8.11□□□□□ -1.11
P06320 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P06320 Gm5566-201ENSMUST00000116118 459 ntBASIC8.11□□□□□ -1.11
P06320 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC8.11□□□□□ -1.11
P06320 Rprl2-201ENSMUST00000157150 290 ntBASIC8.11□□□□□ -1.11
P06320 Gm9824-201ENSMUST00000178707 561 ntBASIC8.11□□□□□ -1.11
P06320 Gm19931-201ENSMUST00000198920 368 ntBASIC8.11□□□□□ -1.11
P06320 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC8.11□□□□□ -1.11
P06320 AC090659.2-201ENSMUST00000225378 1186 ntBASIC8.11□□□□□ -1.11
P06320 AC154621.1-201ENSMUST00000226155 1119 ntBASIC8.11□□□□□ -1.11
P06320 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
P06320 Gm10819-201ENSMUST00000099988 561 ntBASIC8.11□□□□□ -1.11
P06320 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
P06320 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC8.11□□□□□ -1.11
P06320 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P06320 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
P06320 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC8.11□□□□□ -1.11
P06320 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC8.11□□□□□ -1.11
P06320 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Gm45266-201ENSMUST00000210111 2173 ntBASIC8.11□□□□□ -1.11
P06320 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P06320 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
P06320 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P06320 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P06320 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P06320 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
P06320 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 AC168058.1-201ENSMUST00000219521 2282 ntBASIC8.1□□□□□ -1.11
P06320 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC8.1□□□□□ -1.11
P06320 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC8.1□□□□□ -1.11
P06320 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Gm6018-201ENSMUST00000216090 1306 ntBASIC8.1□□□□□ -1.11
P06320 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC8.1□□□□□ -1.11
P06320 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Gm15460-201ENSMUST00000118147 391 ntBASIC8.1□□□□□ -1.11
P06320 Gm13015-201ENSMUST00000118674 204 ntBASIC8.1□□□□□ -1.11
P06320 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Gm9727-201ENSMUST00000161387 555 ntBASIC8.1□□□□□ -1.11
P06320 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC8.1□□□□□ -1.11
P06320 Mir3113-201ENSMUST00000175478 76 ntBASIC8.1□□□□□ -1.11
P06320 Gm24420-201ENSMUST00000176676 59 ntBASIC8.1□□□□□ -1.11
P06320 Gm6283-201ENSMUST00000182369 1000 ntBASIC8.1□□□□□ -1.11
P06320 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
P06320 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
P06320 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC8.1□□□□□ -1.11
P06320 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms