Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.15□□□□□ -0.3
P01878 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.15□□□□□ -0.3
P01878 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.15□□□□□ -0.3
P01878 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.15□□□□□ -0.3
P01878 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.15□□□□□ -0.3
P01878 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.15□□□□□ -0.3
P01878 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Gm19187-201ENSMUST00000206781 892 ntBASIC13.15□□□□□ -0.3
P01878 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.15□□□□□ -0.3
P01878 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.15□□□□□ -0.3
P01878 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
P01878 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
P01878 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01878 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
P01878 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P01878 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
P01878 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
P01878 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.14□□□□□ -0.31
P01878 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.14□□□□□ -0.31
P01878 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.14□□□□□ -0.31
P01878 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Matn2-206ENSMUST00000228570 2798 ntBASIC13.14□□□□□ -0.31
P01878 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.14□□□□□ -0.31
P01878 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.14□□□□□ -0.31
P01878 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.14□□□□□ -0.31
P01878 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
P01878 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.14□□□□□ -0.31
P01878 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01878 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.13□□□□□ -0.31
P01878 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
P01878 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
P01878 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.13□□□□□ -0.31
P01878 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
P01878 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
P01878 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
P01878 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Gm17812-201ENSMUST00000204935 318 ntBASIC13.13□□□□□ -0.31
P01878 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.13□□□□□ -0.31
P01878 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
P01878 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.13□□□□□ -0.31
P01878 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
P01878 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
P01878 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.13□□□□□ -0.31
P01878 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
P01878 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01878 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
P01878 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01878 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P01878 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01878 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms