Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.12□□□□□ -0.47
Matn4O89029 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.12□□□□□ -0.47
Matn4O89029 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.12□□□□□ -0.47
Matn4O89029 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Matn4O89029 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.11□□□□□ -0.47
Matn4O89029 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.11□□□□□ -0.47
Matn4O89029 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.11□□□□□ -0.47
Matn4O89029 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Mir7654-201ENSMUST00000185082 70 ntBASIC12.11□□□□□ -0.47
Matn4O89029 Gm16372-201ENSMUST00000073088 450 ntBASIC12.11□□□□□ -0.47
Matn4O89029 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Matn4O89029 Mir339-201ENSMUST00000083659 96 ntBASIC12.11□□□□□ -0.47
Matn4O89029 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Matn4O89029 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.11□□□□□ -0.47
Matn4O89029 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.11□□□□□ -0.47
Matn4O89029 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn4O89029 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.1□□□□□ -0.47
Matn4O89029 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.1□□□□□ -0.47
Matn4O89029 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.1□□□□□ -0.47
Matn4O89029 Gm6152-201ENSMUST00000151704 340 ntBASIC12.1□□□□□ -0.47
Matn4O89029 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Matn4O89029 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.1□□□□□ -0.47
Matn4O89029 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Matn4O89029 Gm27390-201ENSMUST00000184516 176 ntBASIC12.1□□□□□ -0.47
Matn4O89029 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.1□□□□□ -0.47
Matn4O89029 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Matn4O89029 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Matn4O89029 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.1□□□□□ -0.47
Matn4O89029 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Matn4O89029 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.1□□□□□ -0.47
Matn4O89029 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.1□□□□□ -0.47
Matn4O89029 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn4O89029 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.1□□□□□ -0.47
Matn4O89029 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Matn4O89029 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Matn4O89029 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms