Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Gm13045-201ENSMUST00000119019 712 ntBASIC13.22□□□□□ -0.29
Syn1O88935 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.22□□□□□ -0.29
Syn1O88935 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.22□□□□□ -0.29
Syn1O88935 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.22□□□□□ -0.29
Syn1O88935 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.22□□□□□ -0.29
Syn1O88935 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.22□□□□□ -0.29
Syn1O88935 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.22□□□□□ -0.29
Syn1O88935 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
Syn1O88935 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Syn1O88935 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.21□□□□□ -0.29
Syn1O88935 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.21□□□□□ -0.29
Syn1O88935 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Gm11450-201ENSMUST00000121144 333 ntBASIC13.21□□□□□ -0.29
Syn1O88935 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Gm22121-201ENSMUST00000175148 54 ntBASIC13.21□□□□□ -0.29
Syn1O88935 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.21□□□□□ -0.29
Syn1O88935 Gm28324-201ENSMUST00000187913 264 ntBASIC13.21□□□□□ -0.29
Syn1O88935 Gm37201-201ENSMUST00000191845 523 ntBASIC13.21□□□□□ -0.29
Syn1O88935 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Syn1O88935 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syn1O88935 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Syn1O88935 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Syn1O88935 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Syn1O88935 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Syn1O88935 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Syn1O88935 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Syn1O88935 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.21□□□□□ -0.3
Syn1O88935 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Syn1O88935 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Syn1O88935 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.2□□□□□ -0.3
Syn1O88935 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Syn1O88935 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Syn1O88935 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.2□□□□□ -0.3
Syn1O88935 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.2□□□□□ -0.3
Syn1O88935 Gm7666-201ENSMUST00000146631 819 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Gm17391-201ENSMUST00000171036 126 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm29615-201ENSMUST00000185371 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm28224-201ENSMUST00000186078 697 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms