Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cops4O88544 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.87□□□□□ -0.51
Cops4O88544 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.87□□□□□ -0.51
Cops4O88544 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.87□□□□□ -0.51
Cops4O88544 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.87□□□□□ -0.51
Cops4O88544 Gm27772-201ENSMUST00000184900 187 ntBASIC11.87□□□□□ -0.51
Cops4O88544 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.87□□□□□ -0.51
Cops4O88544 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.87□□□□□ -0.51
Cops4O88544 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.87□□□□□ -0.51
Cops4O88544 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.87□□□□□ -0.51
Cops4O88544 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.87□□□□□ -0.51
Cops4O88544 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.87□□□□□ -0.51
Cops4O88544 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cops4O88544 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cops4O88544 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.86□□□□□ -0.51
Cops4O88544 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.86□□□□□ -0.51
Cops4O88544 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.86□□□□□ -0.51
Cops4O88544 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Cops4O88544 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Cops4O88544 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.86□□□□□ -0.51
Cops4O88544 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.86□□□□□ -0.51
Cops4O88544 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.86□□□□□ -0.51
Cops4O88544 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.86□□□□□ -0.51
Cops4O88544 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.86□□□□□ -0.51
Cops4O88544 Mir6956-201ENSMUST00000183598 62 ntBASIC11.86□□□□□ -0.51
Cops4O88544 Gm17795-201ENSMUST00000214505 757 ntBASIC11.86□□□□□ -0.51
Cops4O88544 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.86□□□□□ -0.51
Cops4O88544 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Cops4O88544 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cops4O88544 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.86□□□□□ -0.51
Cops4O88544 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cops4O88544 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.86□□□□□ -0.51
Cops4O88544 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cops4O88544 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.85□□□□□ -0.51
Cops4O88544 Gm15240-201ENSMUST00000118156 720 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Gm12403-201ENSMUST00000121384 959 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.85□□□□□ -0.51
Cops4O88544 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.85□□□□□ -0.51
Cops4O88544 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.85□□□□□ -0.51
Cops4O88544 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms