Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.76□□□□□ -0.37
Pknox1O70477 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Pknox1O70477 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.76□□□□□ -0.37
Pknox1O70477 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.76□□□□□ -0.37
Pknox1O70477 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.76□□□□□ -0.37
Pknox1O70477 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.76□□□□□ -0.37
Pknox1O70477 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pknox1O70477 Gm2495-201ENSMUST00000191160 466 ntBASIC12.76□□□□□ -0.37
Pknox1O70477 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.76□□□□□ -0.37
Pknox1O70477 Gm45668-201ENSMUST00000211271 493 ntBASIC12.76□□□□□ -0.37
Pknox1O70477 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.76□□□□□ -0.37
Pknox1O70477 Gm2423-201ENSMUST00000074863 733 ntBASIC12.76□□□□□ -0.37
Pknox1O70477 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Pknox1O70477 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.76□□□□□ -0.37
Pknox1O70477 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.76□□□□□ -0.37
Pknox1O70477 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pknox1O70477 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pknox1O70477 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pknox1O70477 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pknox1O70477 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pknox1O70477 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pknox1O70477 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Gm12928-201ENSMUST00000117115 573 ntBASIC12.75□□□□□ -0.37
Pknox1O70477 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pknox1O70477 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.75□□□□□ -0.37
Pknox1O70477 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pknox1O70477 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.75□□□□□ -0.37
Pknox1O70477 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.75□□□□□ -0.37
Pknox1O70477 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pknox1O70477 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.75□□□□□ -0.37
Pknox1O70477 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.75□□□□□ -0.37
Pknox1O70477 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.75□□□□□ -0.37
Pknox1O70477 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Pknox1O70477 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pknox1O70477 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pknox1O70477 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pknox1O70477 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pknox1O70477 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pknox1O70477 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pknox1O70477 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pknox1O70477 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pknox1O70477 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.74□□□□□ -0.37
Pknox1O70477 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms