Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Chrna4O70174 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.97□□□□□ -0.33
Chrna4O70174 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chrna4O70174 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Chrna4O70174 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Chrna4O70174 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.96□□□□□ -0.33
Chrna4O70174 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.96□□□□□ -0.33
Chrna4O70174 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.96□□□□□ -0.33
Chrna4O70174 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.96□□□□□ -0.33
Chrna4O70174 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.96□□□□□ -0.33
Chrna4O70174 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.96□□□□□ -0.33
Chrna4O70174 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chrna4O70174 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.96□□□□□ -0.34
Chrna4O70174 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chrna4O70174 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chrna4O70174 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Chrna4O70174 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Chrna4O70174 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chrna4O70174 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chrna4O70174 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chrna4O70174 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.95□□□□□ -0.34
Chrna4O70174 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chrna4O70174 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chrna4O70174 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Gm1335-201ENSMUST00000121653 386 ntBASIC12.95□□□□□ -0.34
Chrna4O70174 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.95□□□□□ -0.34
Chrna4O70174 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.95□□□□□ -0.34
Chrna4O70174 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.95□□□□□ -0.34
Chrna4O70174 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.95□□□□□ -0.34
Chrna4O70174 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.95□□□□□ -0.34
Chrna4O70174 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chrna4O70174 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Chrna4O70174 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.95□□□□□ -0.34
Chrna4O70174 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.95□□□□□ -0.34
Chrna4O70174 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chrna4O70174 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chrna4O70174 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chrna4O70174 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chrna4O70174 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chrna4O70174 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chrna4O70174 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chrna4O70174 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chrna4O70174 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.94□□□□□ -0.34
Chrna4O70174 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.94□□□□□ -0.34
Chrna4O70174 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms