Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Alx4O35137 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.47□□□□□ -0.57
Alx4O35137 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.47□□□□□ -0.57
Alx4O35137 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Alx4O35137 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.47□□□□□ -0.57
Alx4O35137 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Alx4O35137 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Gm27989-201ENSMUST00000184721 107 ntBASIC11.47□□□□□ -0.57
Alx4O35137 Gm28760-201ENSMUST00000185995 736 ntBASIC11.47□□□□□ -0.57
Alx4O35137 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.47□□□□□ -0.57
Alx4O35137 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.47□□□□□ -0.57
Alx4O35137 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.47□□□□□ -0.57
Alx4O35137 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Alx4O35137 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Alx4O35137 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Alx4O35137 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Alx4O35137 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Alx4O35137 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Gm13616-201ENSMUST00000120600 222 ntBASIC11.46□□□□□ -0.57
Alx4O35137 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.46□□□□□ -0.57
Alx4O35137 Gm24694-201ENSMUST00000180054 110 ntBASIC11.46□□□□□ -0.57
Alx4O35137 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Alx4O35137 Gm27663-201ENSMUST00000184839 110 ntBASIC11.46□□□□□ -0.57
Alx4O35137 Gm7063-201ENSMUST00000186840 981 ntBASIC11.46□□□□□ -0.57
Alx4O35137 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.46□□□□□ -0.57
Alx4O35137 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.46□□□□□ -0.57
Alx4O35137 Gm44069-201ENSMUST00000204898 506 ntBASIC11.46□□□□□ -0.57
Alx4O35137 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Itm2b-204ENSMUST00000228637 783 ntBASIC11.46□□□□□ -0.57
Alx4O35137 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Alx4O35137 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Alx4O35137 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Alx4O35137 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Alx4O35137 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms