Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
B020004C17RikJ3QP07 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
B020004C17RikJ3QP07 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
B020004C17RikJ3QP07 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
B020004C17RikJ3QP07 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
B020004C17RikJ3QP07 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
B020004C17RikJ3QP07 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.28□□□□□ -0.12
B020004C17RikJ3QP07 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
B020004C17RikJ3QP07 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Gm18304-201ENSMUST00000189162 546 ntBASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Gm9555-201ENSMUST00000200908 583 ntBASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Gm19994-201ENSMUST00000217086 586 ntBASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
B020004C17RikJ3QP07 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Gm18038-201ENSMUST00000197900 485 ntBASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Ntng1-201ENSMUST00000051253 327 ntBASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
B020004C17RikJ3QP07 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
B020004C17RikJ3QP07 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms