Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.44■□□□□ 0.06
NpcdF8VQB8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Gm13045-201ENSMUST00000119019 712 ntBASIC15.44■□□□□ 0.06
NpcdF8VQB8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC15.44■□□□□ 0.06
NpcdF8VQB8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.44■□□□□ 0.06
NpcdF8VQB8 Gm18893-201ENSMUST00000198416 943 ntBASIC15.44■□□□□ 0.06
NpcdF8VQB8 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.44■□□□□ 0.06
NpcdF8VQB8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.44■□□□□ 0.06
NpcdF8VQB8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.43■□□□□ 0.06
NpcdF8VQB8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.43■□□□□ 0.06
NpcdF8VQB8 Gm13888-201ENSMUST00000119148 422 ntBASIC15.43■□□□□ 0.06
NpcdF8VQB8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.43■□□□□ 0.06
NpcdF8VQB8 Gm32999-201ENSMUST00000192693 562 ntBASIC15.43■□□□□ 0.06
NpcdF8VQB8 Gm37666-201ENSMUST00000194110 866 ntBASIC15.43■□□□□ 0.06
NpcdF8VQB8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Gm22058-201ENSMUST00000083393 310 ntBASIC15.43■□□□□ 0.06
NpcdF8VQB8 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NpcdF8VQB8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Gm17812-201ENSMUST00000204935 318 ntBASIC15.42■□□□□ 0.06
NpcdF8VQB8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Acot6-202ENSMUST00000222921 3622 ntBASIC15.42■□□□□ 0.06
NpcdF8VQB8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms