Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cpsf4lE9Q2N0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Gm25927-201ENSMUST00000175058 117 ntBASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Gm6222-202ENSMUST00000182143 629 ntBASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Gm5186-201ENSMUST00000218781 920 ntBASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cpsf4lE9Q2N0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms