Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Gm4862-201ENSMUST00000170405 438 ntBASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Gm18038-201ENSMUST00000197900 485 ntBASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Gm19187-201ENSMUST00000206781 892 ntBASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Gm39404-201ENSMUST00000216350 313 ntBASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Dchs1E9PVD3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Dchs1E9PVD3 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm12628-201ENSMUST00000122193 382 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm9996-201ENSMUST00000070359 913 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Mir181d-201ENSMUST00000102383 72 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm11980-201ENSMUST00000121445 986 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm10774-201ENSMUST00000188689 204 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm4482-201ENSMUST00000200876 742 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm3793-201ENSMUST00000204973 672 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm12036-201ENSMUST00000120008 530 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Gm5621-201ENSMUST00000187303 640 ntBASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Dchs1E9PVD3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Dchs1E9PVD3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms