Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.92□□□□□ -0.34
Gm28043E0CXC2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm28043E0CXC2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm28043E0CXC2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gm15678-201ENSMUST00000117573 960 ntBASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gm38223-201ENSMUST00000194484 695 ntBASIC12.9□□□□□ -0.34
Gm28043E0CXC2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gm18018-201ENSMUST00000198273 408 ntBASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.9□□□□□ -0.34
Gm28043E0CXC2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm28043E0CXC2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Gm28043E0CXC2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm28043E0CXC2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Gm28043E0CXC2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms