Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.52□□□□□ -0.57
Shank1D3YZU1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Shank1D3YZU1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm13996-201ENSMUST00000118456 430 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Rprl1-202ENSMUST00000198476 238 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm11667-201ENSMUST00000119828 486 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm8194-201ENSMUST00000159783 859 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm27552-201ENSMUST00000183351 62 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm27844-201ENSMUST00000183613 62 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gm44545-201ENSMUST00000208262 746 ntBASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shank1D3YZU1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Gm8712-201ENSMUST00000221090 701 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms