Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11127A7VMS2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Gm15240-201ENSMUST00000118156 720 ntBASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11127A7VMS2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm12151-201ENSMUST00000121374 290 ntBASIC11.4□□□□□ -0.58
Gm11127A7VMS2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.4□□□□□ -0.58
Gm11127A7VMS2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.4□□□□□ -0.58
Gm11127A7VMS2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Gm11127A7VMS2 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.4□□□□□ -0.59
Gm11127A7VMS2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm11127A7VMS2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms