Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm15460-201ENSMUST00000118147 391 ntBASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm13365-201ENSMUST00000121188 973 ntBASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm10253-201ENSMUST00000194270 940 ntBASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 BC043934-202ENSMUST00000185694 2356 ntBASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm9229-201ENSMUST00000222777 126 ntBASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Mir497b-201ENSMUST00000093601 125 ntBASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms